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資源導航

  • 資源導航
  • Exome and whole genome variant detection
1. ExomeCopy
CNV detection from exome sequencing read depth
標簽：Exome and Whole genome variant detection,?Copy number estimation,?Exome analysis
2. Breakpointer
Breakpointer is a fast tool for locating sequence breakpoints from the alignment of single end reads (SE) produced by next generation sequencing (NGS). It adopts a heuristic method in searching for local mapping signatures created by insertion/deletions (indels) or more complex structur...
標簽：Exome and Whole genome variant detection,?InDel discovery
3. GenomeBrowse
A free genome browser for exploring sequencing pile-up and coverage data with numerous annotation tracks hosted on the cloud.
標簽：Sequence analysis,?DNA-Seq,Alignment,?De novo sequencing,Exome analysis,?Exome and whole genome variant detection,?Genetics,?Whole Genome Resequencing,?Next Generation Sequencing,Genomics
4. Variation toolkit
A set of C++ tools for the interpretation of VCF data.
標簽：Genomics,?Exome and whole genome variant detection,?SNP Annotation
5. IOmics
iOmics is a cloud based workflow analysis framework for managing, analyzing and visualizing NGS data.
標簽：Genomics,?Transcriptomics,Epigenomics,?RNA-Seq,?Exome and Whole genome variant detection
6. RTG Investigator
Comprehensive analysis pipelines powered with unique mapping speed and sensitivity deliver deep genomic analysis in variant detection and metagenomic applications with Illumina, Ion Torrent, Complete Genomics and Roche 454 data sets.
標簽：Exome and whole genome variant detection,?Metagenomics,?SNP discovery,?InDel discovery
7. Spiral Genetics
Spiral Genetics provides a novel aligner/variant caller, Anchored Assembly, which can detect large structural variations using short read NGS data with unmatched precision.
標簽：Alignment,?DNA-Seq,?Exome and Whole genome variant detection,?De novo Assembly,Genomic Assembly,?Mapping,Quality Control,?Read alignment,?Reference assembly,Resequencing,?SNP discovery,Sequence analysis,?Whole Genome Resequencing